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mcb-122
by
admin
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last modified
2006-03-23 17:19
Henning Stahlberg, PhD.
5 Briggs Hall
Davis, CA 95616, USA
Phone: +1 (530) 752 8282
email: HStahlberg at ucdavis.edu
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Molecular & Cellular Biology (MCB)
College of Biological Sciences (CBS)
University of California at Davis
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Structure and Function of Proteins
Winter Quarter 2006: Mo, Wed, Fr, 9:00 - 9:50 am, in room Storer 1322
Office hours: Monday, 11:00 am, in Science Lab Building (SLB) 3061
Teaching Assistant: Zhenming Du
Office Hours: Thursday, 10:00 am, in Science Lab Building (SLB) 3061
email: ZDu at ucdavis.edu
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| Date |
Titel |
Downloads and Links |
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Syllabus
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Syllabus (PDF, 80 kB) |
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Tools |
Melvyl UC Library
eJournals at UC Davis
PyMOL Viewer Download
The RCSB Protein Data Bank (PDB)
Chimera
EMD Search |
| Wed, 1/4 |
Amino Acids |
Handout (PDF, 444 kB)
Audio (MP3, 10.9 MB, Chopped Quality)
Amino Acids Table (JPEG, 148 kB)
Wiki: Amino Acids |
| Fri, 1/6 |
Amino Acid Composition, Protein Sequencing, Edman Degradation |
Handout (PDF, 2.3 MB)
Audio (MP3, 11.2 MB)
Clostripain (PDF, 36 kB) |
| Mon, 1/9 |
Physical Interactions |
Handout (PDF, 1.2 MB)
Audio (MP3, 10.3 MB)
Bond Energies (PDF, 188 kB) |
| Wed, 1/11 |
Geometry of Peptide Chains, Secondary Structure of Proteins |
Handout (PDF, 900 kB, reduced resolution)
or: Handout (PDF, 5.5 MB, full resolution)
Audio (MP3, 10.9 MB) |
| Fri, 1/13 |
Protein Synthesis, The Ribosome |
Handout (PDF, 1.1 MB)
Audio (MP3, 8.7 MB) |
| Mon, 1/16 |
Martin Luther King Jr. Day |
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| Wed, 1/18 |
Topogenesis |
Handout (PDF, 1.7 MB)
Audio (MP3, 10.6 MB) |
| Fri, 1/20 |
Protein Secretion |
Handout (PDF, 668 kB)
Audio (MP3, 9.3 MB)
Wickner, Science 2005 (PDF, 212 kB)
Marlovits, Science 2004 (PDF, 244 kB)
Theriot Lab Movie Collection
Invasion movie (Quicktime Movie, 12.7 MB) |
| Mon, 1/23 |
Protein Expression |
Handout (PDF, 888 kB)
Audio (MP3, 10.8 MB)
Spirin Roche Diag. 2003 (PDF, 116 kB)
Roosild et al., Science 2005, Mistic (PDF, 376 kB) |
| Wed, 1/25 |
Protein Stability |
Audio (MP3, 10.4 MB) |
| Fri, 1/27 |
Protein Stability (2) |
Handout (PDF, 1.2 MB)
Audio (MP3, 9.9 MB) |
| Mon, 1/30 |
Protein Degradation |
Handout (PDF, 1.6 MB)
Audio (MP3, 10.5 MB)
Walz, JSB 1998 article (PDF, 352 kB)
Whitby, Nature 2000 article (PDF, 604 kB) |
| Wed, 2/1 |
Protein Purification, HPLC |
Audio (MP3, 10.6 MB) |
| Fri, 2/3 |
Protein Purification (2) |
Handout (PDF, 704 kB)
Audio (PM3, 10.3 MB) |
| Mon, 2/6 |
Midterm Exam |
Midterm Key (PDF, 448 kB)
Midterm Results by SID (PDF, 28 kB) |
| Wed, 2/8 |
MS - Mass Spectrometry, Applications
(Julie Leary, Guest Lecture) |
Handout (PDF, 2.4 MB)
Audio (MP3, 10.5 MB)
Julie Leary's Research
Julie Leary at MCB |
| Fri, 2/10 |
MS - Mass Spectrometry, Hardware |
Handout (PDF, 1.0 MB)
Audio (MP3, 10.0 MB)
American Society for MassSpec
Ion Sources
Sumner Lab Interview (Flashplayer, Broadband)
Sumner Lab Interview (Flashplayer, DialUp) |
| Mon, 2/13 |
Fourier Transformation (1) |
Handout (PDF, 628 kB)
Audio (MP3, 9.5 MB) |
| Wed, 2/15 |
Fourier Transformation (2) |
Audio (MP3, 10.1 MB) |
| Fri, 2/17 |
XRD: Instrumentation |
Handout (PDF, 1.5 MB)
Audio (MP3, 10.5 MB) |
| Mon, 2/20 |
Presidents' Day |
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| Wed, 2/22 |
XRD: Application |
Audio (MP3, 10.1 MB) |
| Fri, 2/24 |
XRD: Application (2) |
Audio (MP3, 9.5 MB) |
| Mon, 2/27 |
TEM (1) |
Handout (PDF, 3.9 MB)
(No Audio) |
| Wed, 3/1 |
TEM (2) |
Audio (MP3, 9.6 MB) |
| Fri, 3/3 |
AFM (1) |
Handout (PDF, 4.7 MB)
Audio (MP3, 9.8 MB) |
| Mon, 3/6 |
AFM (2) |
Audio (MP3, 9.0 MB) |
| Wed, 3/8 |
ATP Synthases (1) |
Handout (PDF, 5.7 MB)
Audio (MP3, 10.6 MB) |
| Fri, 3/10 |
ATP Synthases (2) |
Audio (MP3, 10.7 MB) |
| Mon, 3/13 |
Potassium Channels |
Handout (PDF, 2.3 MB)
Audio (MP3, 9.2 MB)
PyMOL Viewer Download
The RCSB Protein Data Bank (PDB)
The Channel Zoo
1BL8: KcsA PDB file
McKinnon Science 1998 article (KcsA) (1.2 MB) |
| Wed, 3/15 |
Repetition |
Audio (MP3, 12.1 MB) |
| Fri, 3/17, 8:00 am in the normal lecture room |
Final Exam
Calculator allowed, but otherwise closed book |
Red Line (March 13, 2006) (PDF, 88 kB) |
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Key to the final exam
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Results of the Final, by SID
Histogram of the Total Results (1/3 Midterm + 2/3 Final) |
To read the PDF files, you need the
Acrobat Reader.
To see the Quicktime movies, you need the
QuickTime Player.
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